Loa loa sequencing on 454 using fragment and paired end libraries to ... - SRA

SRX004716: Loa loa sequencing on 454 using fragment and paired end libraries to a total of 45X coverage.
1 LS454 (454 GS FLX) run: 271,066 spots, 81.9M bases, 160.8Mb downloads

UUID: f297299b-20d8-4ea6-9c97-16edf53c09b9

Design: 454 sequencing of Loa loa via random selection

Submitted by: Broad Institute (BI)

Study: Loa loa genome sequencing project

PRJNA37757 • SRP000756 • All experiments • All runs

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<b><i>Loa loa</i></b>. A draft assembly from Loa loa will be generated by a collaborative effort of the Broad Institute and Harvard University.

Sample: Generic sample from Loa loa

SAMN00103043 • SRS002955 • All experiments • All runs

Organism: Loa loa

Library:

Name: 454-2017

Instrument: 454 GS FLX

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Construction protocol: Paired end library to 30X physical coverage

Spot descriptor:

barcode

Group tag	Basecalls
	CCTCTC

11 forward reverse

Experiment attributes: (show all 5 attributes...) (hide...)

gssr_id: 29035.1

lsid: BROAD:SEQUENCING_SAMPLE:29035.1

material_type: Genomic DNA

project: G1815

work_request: 17845

Pipeline: show...hide...

Name	Step	Program	Version
base caller	2009-02-24 14:22:30.0	454BaseCaller	2.0.00.17

Runs: 1 run, 271,066 spots, 81.9M bases, 160.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR016376	271,066	81.9M	160.8Mb	2009-05-20

ID:: 4972

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